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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790534.1_cds_XP_016502098.1_1488
CDS Infomation

[gene=LOC107820345] [db_xref=GeneID:107820345] [protein=E3 ubiquitin-protein ligase SINAT5-like] [protein_id=XP_016502098.1] [location=complement(join(1134..1496,1992..2378,4472..4717))] [gbkey=CDS]
Sequence

ATGGAGTATGATAGCATTGAATGTGTATCATCTTCAGATGGTATTATAGATGAAGATGAG
ATTCCTCAACACATAAATATAATTCGTTCTCAGTTCAAGACGGCCCACAATAACAACAAT
AGCACCAGCATATTATGTGATGGGAATAGCAATAAAGGGGGAATTGCTATAAATCCAGCT
ACTAGCGTTCATGAGCTTCTTGAATGCCCTGTTTGTACCAATTCTATGTACCCTCCCATC
CATCAGTGTCACAATGGGCACACTATCTGTTCAACGTGTAAAGCGAGAGTACACAACCGA
TGTCCCACTTGTAGACAGGAGCTTGGCGATATCAGATGTTTAGCACTAGAAAAGGTGGCT
GAATCACTTGAGCTGCCTTGCAAATATGGCTCTCTTGGATGTCCTGAGATATTTCCTTAT
TACAGTAAGCTGAAACATGAGTCAGCGTGTAATTTTAGACCATACAACTGCCCGTATGCT
GGGTCGGAGTGTGCAGTTGTTGGTGATATTCCTTATTTGGTTACTCATTTGAAGGATGAT
CACAAGGTAGACATGCACTCTGGATGCACTTTTAACCATCGCTATGTCAAATCTAATCCT
CGGGAAGTGGAAAATGCCACGTGGATGTTAACTGTTTTCAATTGTTTTGGTCAGTACTTC
TGTCTCCATTTTGAAGCATTTCAGCTTGGAATGGCACCCGTATACATGGCATTCCTTCGG
TTTATGGGAGACGAGACAGAGGCACGAAACTACAGCTACAGCCTGGAAGTAGGGGGAAAT
GGAAGGAAGCTTATCTGGGAAGGTACACCCCGAAGTATAAGAGACAGTCATAGGAAAGTT
AGGGATAGCCATGACGGGCTCCTAATACAACGTAACATGGCCCTATTCTTCTCCGGTGGG
GACAGAAAGGAGCTCAAGCTACGGGTGACTGGAAGAATATGGAAGGAACAACAGAATCCA
GAAGAAGGAACATGCATTCCCAACCTCTGTAGCTAA

Peptide Sequence

PEP ID

XP_016502098.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Nicotiana tabacum]
Sequence

MEYDSIECVSSSDGIIDEDEIPQHINIIRSQFKTAHNNNNSTSILCDGNSNKGGIAINPA
TSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKVA
ESLELPCKYGSLGCPEIFPYYSKLKHESACNFRPYNCPYAGSECAVVGDIPYLVTHLKDD
HKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLR
FMGDETEARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLLIQRNMALFFSGG
DRKELKLRVTGRIWKEQQNPEEGTCIPNLCS

Transcript Sequence

Gene sequence data has not been registered.